WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M6.1c.1 Sequence Name  M6.1c.1
Length (nt)  2097   Chromosome Location  X: 646066-650092
Chromosome . Primary Identifier  X Chromosome Location . Start  646066
Chromosome Location . End  650092 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M6.1c M6.1c 2097   X: 646066-646308

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M6.1c.1 646066 650092 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222203   243   X: 646066-646308 Caenorhabditis elegans
Exon222211   660   X: 646358-647017 Caenorhabditis elegans
Exon222216   92   X: 647287-647378 Caenorhabditis elegans
Exon222221   253   X: 647475-647727 Caenorhabditis elegans
Exon222226   119   X: 647773-647891 Caenorhabditis elegans
Exon222231   200   X: 648351-648550 Caenorhabditis elegans
Exon222236   217   X: 648789-649005 Caenorhabditis elegans
Exon222241   111   X: 649055-649165 Caenorhabditis elegans
Exon222246   136   X: 649372-649507 Caenorhabditis elegans
Exon222248   66   X: 650027-650092 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M6.1c.1 646066 650092 -1

1 Sequence

Length
2097

1 Sequence Ontology Term

Identifier Name Description
transcript