WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D7.3.1 Sequence Name  T19D7.3.1
Length (nt)  1127   Chromosome Location  X: 656184-658516
Chromosome . Primary Identifier  X Chromosome Location . Start  656184
Chromosome Location . End  658516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020571 lpr-7 T19D7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D7.3 T19D7.3 954   X: 656265-656425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D7.3.1 656184 658516 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222261   242   X: 656184-656425 Caenorhabditis elegans
Exon222262   69   X: 656586-656654 Caenorhabditis elegans
Exon222263   123   X: 656709-656831 Caenorhabditis elegans
Exon222264   118   X: 656963-657080 Caenorhabditis elegans
Exon222265   49   X: 657680-657728 Caenorhabditis elegans
Exon222266   86   X: 657771-657856 Caenorhabditis elegans
Exon222267   70   X: 657907-657976 Caenorhabditis elegans
Exon222268   184   X: 658024-658207 Caenorhabditis elegans
Exon222269   186   X: 658331-658516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D7.3.1 656184 658516 1

1 Sequence

Length
1127

1 Sequence Ontology Term

Identifier Name Description
transcript