WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02G3.1a.1 Sequence Name  F02G3.1a.1
Length (nt)  4307   Chromosome Location  X: 691913-703040
Chromosome . Primary Identifier  X Chromosome Location . Start  691913
Chromosome Location . End  703040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02G3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017184 ncam-1 F02G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02G3.1a F02G3.1a 2787   X: 693029-693083

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02G3.1a.1 691913 703040 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222320   1171   X: 691913-693083 Caenorhabditis elegans
Exon222327   160   X: 695262-695421 Caenorhabditis elegans
Exon222331   137   X: 695577-695713 Caenorhabditis elegans
Exon222336   135   X: 696257-696391 Caenorhabditis elegans
Exon222342   147   X: 697073-697219 Caenorhabditis elegans
Exon222347   122   X: 697319-697440 Caenorhabditis elegans
Exon222356   157   X: 699515-699671 Caenorhabditis elegans
Exon222361   350   X: 699724-700073 Caenorhabditis elegans
Exon222366   163   X: 700245-700407 Caenorhabditis elegans
Exon222371   288   X: 700455-700742 Caenorhabditis elegans
Exon222376   828   X: 700824-701651 Caenorhabditis elegans
Exon222381   196   X: 702248-702443 Caenorhabditis elegans
Exon222387   109   X: 702490-702598 Caenorhabditis elegans
Exon222392   344   X: 702697-703040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02G3.1a.1 691913 703040 1

1 Sequence

Length
4307

1 Sequence Ontology Term

Identifier Name Description
transcript