WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02G3.1a.2 Sequence Name  F02G3.1a.2
Length (nt)  3347   Chromosome Location  X: 692978-703047
Chromosome . Primary Identifier  X Chromosome Location . Start  692978
Chromosome Location . End  703047 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02G3.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017184 ncam-1 F02G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02G3.1a F02G3.1a 2787   X: 693029-693083

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02G3.1a.2 692978 703047 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222322   106   X: 692978-693083 Caenorhabditis elegans
Exon222328   160   X: 695262-695421 Caenorhabditis elegans
Exon222332   137   X: 695577-695713 Caenorhabditis elegans
Exon222337   135   X: 696257-696391 Caenorhabditis elegans
Exon222343   147   X: 697073-697219 Caenorhabditis elegans
Exon222348   122   X: 697319-697440 Caenorhabditis elegans
Exon222357   157   X: 699515-699671 Caenorhabditis elegans
Exon222362   350   X: 699724-700073 Caenorhabditis elegans
Exon222367   163   X: 700245-700407 Caenorhabditis elegans
Exon222372   288   X: 700455-700742 Caenorhabditis elegans
Exon222377   828   X: 700824-701651 Caenorhabditis elegans
Exon222382   196   X: 702248-702443 Caenorhabditis elegans
Exon222389   558   X: 702490-703047 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02G3.1a.2 692978 703047 1

1 Sequence

Length
3347

1 Sequence Ontology Term

Identifier Name Description
transcript