WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02G3.1b.1 Sequence Name  F02G3.1b.1
Length (nt)  3196   Chromosome Location  X: 693029-702999
Chromosome . Primary Identifier  X Chromosome Location . Start  693029
Chromosome Location . End  702999 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02G3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017184 ncam-1 F02G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02G3.1b F02G3.1b 2742   X: 693029-693083

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02G3.1b.1 693029 702999 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222323   55   X: 693029-693083 Caenorhabditis elegans
Exon222330   160   X: 695262-695421 Caenorhabditis elegans
Exon222334   137   X: 695577-695713 Caenorhabditis elegans
Exon222339   135   X: 696257-696391 Caenorhabditis elegans
Exon222345   147   X: 697073-697219 Caenorhabditis elegans
Exon222350   122   X: 697319-697440 Caenorhabditis elegans
Exon222359   157   X: 699515-699671 Caenorhabditis elegans
Exon222364   350   X: 699724-700073 Caenorhabditis elegans
Exon222369   163   X: 700245-700407 Caenorhabditis elegans
Exon222374   288   X: 700455-700742 Caenorhabditis elegans
Exon222379   828   X: 700824-701651 Caenorhabditis elegans
Exon222385   351   X: 702248-702598 Caenorhabditis elegans
Exon222390   303   X: 702697-702999 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02G3.1b.1 693029 702999 1

1 Sequence

Length
3196

1 Sequence Ontology Term

Identifier Name Description
transcript