WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02A10.2f.1 Sequence Name  M02A10.2f.1
Length (nt)  1485   Chromosome Location  X: 703130-714478
Chromosome . Primary Identifier  X Chromosome Location . Start  703130
Chromosome Location . End  714478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02A10.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002150 irk-2 M02A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02A10.2f M02A10.2f 1485   X: 703130-703164

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.2f.1 703130 714478 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222397   35   X: 703130-703164 Caenorhabditis elegans
Exon222404   112   X: 703877-703988 Caenorhabditis elegans
Exon222411   63   X: 704035-704097 Caenorhabditis elegans
Exon222418   117   X: 704325-704441 Caenorhabditis elegans
Exon222425   124   X: 705295-705418 Caenorhabditis elegans
Exon222432   88   X: 706006-706093 Caenorhabditis elegans
Exon222439   128   X: 706457-706584 Caenorhabditis elegans
Exon222446   68   X: 706634-706701 Caenorhabditis elegans
Exon222456   93   X: 707582-707674 Caenorhabditis elegans
Exon222463   81   X: 707723-707803 Caenorhabditis elegans
Exon222470   73   X: 708013-708085 Caenorhabditis elegans
Exon222477   104   X: 708570-708673 Caenorhabditis elegans
Exon222484   136   X: 708726-708861 Caenorhabditis elegans
Exon222491   56   X: 708909-708964 Caenorhabditis elegans
Exon222497   116   X: 709892-710007 Caenorhabditis elegans
Exon222501   91   X: 714388-714478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.2f.1 703130 714478 -1

1 Sequence

Length
1485

1 Sequence Ontology Term

Identifier Name Description
transcript