WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02A10.2d.1 Sequence Name  M02A10.2d.1
Length (nt)  2005   Chromosome Location  X: 703233-710009
Chromosome . Primary Identifier  X Chromosome Location . Start  703233
Chromosome Location . End  710009 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02A10.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002150 irk-2 M02A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02A10.2d M02A10.2d 1383   X: 703845-703988

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.2d.1 703233 710009 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222399   756   X: 703233-703988 Caenorhabditis elegans
Exon222409   63   X: 704035-704097 Caenorhabditis elegans
Exon222417   117   X: 704325-704441 Caenorhabditis elegans
Exon222423   124   X: 705295-705418 Caenorhabditis elegans
Exon222430   88   X: 706006-706093 Caenorhabditis elegans
Exon222437   128   X: 706457-706584 Caenorhabditis elegans
Exon222444   68   X: 706634-706701 Caenorhabditis elegans
Exon222454   93   X: 707582-707674 Caenorhabditis elegans
Exon222461   81   X: 707723-707803 Caenorhabditis elegans
Exon222468   73   X: 708013-708085 Caenorhabditis elegans
Exon222475   104   X: 708570-708673 Caenorhabditis elegans
Exon222482   136   X: 708726-708861 Caenorhabditis elegans
Exon222489   56   X: 708909-708964 Caenorhabditis elegans
Exon222498   118   X: 709892-710009 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.2d.1 703233 710009 -1

1 Sequence

Length
2005

1 Sequence Ontology Term

Identifier Name Description
transcript