WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02A10.3a.1 Sequence Name  M02A10.3a.1
Length (nt)  2211   Chromosome Location  X: 720331-725957
Chromosome . Primary Identifier  X Chromosome Location . Start  720331
Chromosome Location . End  725957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02A10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004829 sli-1 M02A10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02A10.3a M02A10.3a 1749   X: 720729-720923

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.3a.1 720331 725957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222505   593   X: 720331-720923 Caenorhabditis elegans
Exon222506   126   X: 722153-722278 Caenorhabditis elegans
Exon222508   174   X: 722336-722509 Caenorhabditis elegans
Exon222511   220   X: 723164-723383 Caenorhabditis elegans
Exon222514   270   X: 723433-723702 Caenorhabditis elegans
Exon222517   150   X: 724095-724244 Caenorhabditis elegans
Exon222520   293   X: 724298-724590 Caenorhabditis elegans
Exon222523   129   X: 725139-725267 Caenorhabditis elegans
Exon222526   51   X: 725541-725591 Caenorhabditis elegans
Exon222527   75   X: 725707-725781 Caenorhabditis elegans
Exon222530   130   X: 725828-725957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.3a.1 720331 725957 -1

1 Sequence

Length
2211

1 Sequence Ontology Term

Identifier Name Description
transcript