WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04G9.6a.1 Sequence Name  T04G9.6a.1
Length (nt)  1452   Chromosome Location  X: 781008-784953
Chromosome . Primary Identifier  X Chromosome Location . Start  781008
Chromosome Location . End  784953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04G9.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020217 T04G9.6 T04G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04G9.6a T04G9.6a 1452   X: 781008-781040

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04G9.6a.1 781008 784953 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222627   33   X: 781008-781040 Caenorhabditis elegans
Exon222628   54   X: 781085-781138 Caenorhabditis elegans
Exon222630   150   X: 781197-781346 Caenorhabditis elegans
Exon222632   147   X: 781393-781539 Caenorhabditis elegans
Exon222634   186   X: 781597-781782 Caenorhabditis elegans
Exon222636   201   X: 782407-782607 Caenorhabditis elegans
Exon222638   246   X: 783294-783539 Caenorhabditis elegans
Exon222640   90   X: 783583-783672 Caenorhabditis elegans
Exon222642   173   X: 784168-784340 Caenorhabditis elegans
Exon222644   136   X: 784385-784520 Caenorhabditis elegans
Exon222646   36   X: 784918-784953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04G9.6a.1 781008 784953 -1

1 Sequence

Length
1452

1 Sequence Ontology Term

Identifier Name Description
transcript