WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04G9.1b Sequence Name  T04G9.1b
Length (nt)  4797   Chromosome Location  X: 788411-788414
Chromosome . Primary Identifier  X Chromosome Location . Start  788411
Chromosome Location . End  788414
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04G9.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51662 ATTF-5, isoform b 183.3 1598 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052407
WBRNAi00018150
WBRNAi00035147

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04G9.1b 788411 788414 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020214 attf-5 T04G9.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04G9.1b 788411 788414 1
CDS:T04G9.1b 788482 788598 1
CDS:T04G9.1b 789699 790270 1
CDS:T04G9.1b 790521 790613 1
CDS:T04G9.1b 790844 790954 1
CDS:T04G9.1b 791016 791355 1
CDS:T04G9.1b 791415 791602 1
CDS:T04G9.1b 791647 791879 1
CDS:T04G9.1b 791926 792029 1
CDS:T04G9.1b 792123 792250 1
CDS:T04G9.1b 792297 792716 1
CDS:T04G9.1b 792765 795183 1
CDS:T04G9.1b 795233 795300 1

1 Sequence

Length
4797

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04G9.1b.1 T04G9.1b.1 5075   X: 788411-796111