WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.2a.1 Sequence Name  F25E2.2a.1
Length (nt)  2039   Chromosome Location  X: 806991-810794
Chromosome . Primary Identifier  X Chromosome Location . Start  806991
Chromosome Location . End  810794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017780 F25E2.2 F25E2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.2a F25E2.2a 1875   X: 807084-807154

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.2a.1 806991 810794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222684   164   X: 806991-807154 Caenorhabditis elegans
Exon222685   215   X: 807209-807423 Caenorhabditis elegans
Exon222686   388   X: 807589-807976 Caenorhabditis elegans
Exon222687   303   X: 808302-808604 Caenorhabditis elegans
Exon222688   216   X: 809053-809268 Caenorhabditis elegans
Exon222689   120   X: 809318-809437 Caenorhabditis elegans
Exon222690   88   X: 809488-809575 Caenorhabditis elegans
Exon222691   77   X: 809870-809946 Caenorhabditis elegans
Exon222693   117   X: 810180-810296 Caenorhabditis elegans
Exon222694   120   X: 810396-810515 Caenorhabditis elegans
Exon222697   231   X: 810564-810794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.2a.1 806991 810794 -1

1 Sequence

Length
2039

1 Sequence Ontology Term

Identifier Name Description
transcript