WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5c.1 Sequence Name  F25E2.5c.1
Length (nt)  2790   Chromosome Location  X: 817926-823846
Chromosome . Primary Identifier  X Chromosome Location . Start  817926
Chromosome Location . End  823846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5c F25E2.5c 2391   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5c.1 817926 823846 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222716   500   X: 817926-818425 Caenorhabditis elegans
Exon222726   137   X: 819004-819140 Caenorhabditis elegans
Exon222735   307   X: 819189-819495 Caenorhabditis elegans
Exon222744   172   X: 819699-819870 Caenorhabditis elegans
Exon222753   53   X: 820203-820255 Caenorhabditis elegans
Exon222763   122   X: 820300-820421 Caenorhabditis elegans
Exon222771   131   X: 820601-820731 Caenorhabditis elegans
Exon222778   661   X: 822022-822682 Caenorhabditis elegans
Exon222790   126   X: 822853-822978 Caenorhabditis elegans
Exon222795   240   X: 823173-823412 Caenorhabditis elegans
Exon222803   152   X: 823459-823610 Caenorhabditis elegans
Exon222816   189   X: 823658-823846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5c.1 817926 823846 -1

1 Sequence

Length
2790

1 Sequence Ontology Term

Identifier Name Description
transcript