WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5b.1 Sequence Name  F25E2.5b.1
Length (nt)  3020   Chromosome Location  X: 817942-825473
Chromosome . Primary Identifier  X Chromosome Location . Start  817942
Chromosome Location . End  825473 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5b F25E2.5b 2595   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5b.1 817942 825473 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222719   484   X: 817942-818425 Caenorhabditis elegans
Exon222725   137   X: 819004-819140 Caenorhabditis elegans
Exon222734   307   X: 819189-819495 Caenorhabditis elegans
Exon222743   172   X: 819699-819870 Caenorhabditis elegans
Exon222752   53   X: 820203-820255 Caenorhabditis elegans
Exon222762   122   X: 820300-820421 Caenorhabditis elegans
Exon222770   131   X: 820601-820731 Caenorhabditis elegans
Exon222784   670   X: 822022-822691 Caenorhabditis elegans
Exon222785   135   X: 822844-822978 Caenorhabditis elegans
Exon222794   240   X: 823173-823412 Caenorhabditis elegans
Exon222802   152   X: 823459-823610 Caenorhabditis elegans
Exon222812   156   X: 823658-823813 Caenorhabditis elegans
Exon222820   189   X: 825074-825262 Caenorhabditis elegans
Exon222825   72   X: 825402-825473 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5b.1 817942 825473 -1

1 Sequence

Length
3020

1 Sequence Ontology Term

Identifier Name Description
transcript