WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H12.1.1 Sequence Name  F39H12.1.1
Length (nt)  1456   Chromosome Location  X: 834778-837823
Chromosome . Primary Identifier  X Chromosome Location . Start  834778
Chromosome Location . End  837823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018212 F39H12.1 F39H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H12.1 F39H12.1 1293   X: 834789-834984

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39H12.1.1 834778 837823 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222846   207   X: 834778-834984 Caenorhabditis elegans
Exon222847   73   X: 835042-835114 Caenorhabditis elegans
Exon222848   61   X: 835346-835406 Caenorhabditis elegans
Exon222849   265   X: 835783-836047 Caenorhabditis elegans
Exon222850   149   X: 836098-836246 Caenorhabditis elegans
Exon222851   228   X: 836291-836518 Caenorhabditis elegans
Exon222852   156   X: 836580-836735 Caenorhabditis elegans
Exon222853   111   X: 837462-837572 Caenorhabditis elegans
Exon222854   206   X: 837618-837823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39H12.1.1 834778 837823 1

1 Sequence

Length
1456

1 Sequence Ontology Term

Identifier Name Description
transcript