WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56F10.2.1 Sequence Name  F56F10.2.1
Length (nt)  1303   Chromosome Location  X: 859615-862461
Chromosome . Primary Identifier  X Chromosome Location . Start  859615
Chromosome Location . End  862461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018985 F56F10.2 F56F10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56F10.2 F56F10.2 1134   X: 859948-860010

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56F10.2.1 859615 862461 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222881   125   X: 859615-859739 Caenorhabditis elegans
Exon222882   77   X: 859934-860010 Caenorhabditis elegans
Exon222883   71   X: 860267-860337 Caenorhabditis elegans
Exon222884   166   X: 860387-860552 Caenorhabditis elegans
Exon222885   141   X: 860602-860742 Caenorhabditis elegans
Exon222886   90   X: 860786-860875 Caenorhabditis elegans
Exon222887   165   X: 861092-861256 Caenorhabditis elegans
Exon222888   109   X: 861304-861412 Caenorhabditis elegans
Exon222889   82   X: 861475-861556 Caenorhabditis elegans
Exon222890   150   X: 861986-862135 Caenorhabditis elegans
Exon222892   127   X: 862335-862461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56F10.2.1 859615 862461 1

1 Sequence

Length
1303

1 Sequence Ontology Term

Identifier Name Description
transcript