WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56F10.1.1 Sequence Name  F56F10.1.1
Length (nt)  1704   Chromosome Location  X: 872603-875948
Chromosome . Primary Identifier  X Chromosome Location . Start  872603
Chromosome Location . End  875948 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018984 F56F10.1 F56F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56F10.1 F56F10.1 1623   X: 872605-872702

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56F10.1.1 872603 875948 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222916   100   X: 872603-872702 Caenorhabditis elegans
Exon222917   130   X: 872755-872884 Caenorhabditis elegans
Exon222918   188   X: 872931-873118 Caenorhabditis elegans
Exon222919   233   X: 873359-873591 Caenorhabditis elegans
Exon222920   136   X: 873641-873776 Caenorhabditis elegans
Exon222921   109   X: 873967-874075 Caenorhabditis elegans
Exon222922   217   X: 874221-874437 Caenorhabditis elegans
Exon222923   100   X: 874534-874633 Caenorhabditis elegans
Exon222924   112   X: 874680-874791 Caenorhabditis elegans
Exon222925   205   X: 875452-875656 Caenorhabditis elegans
Exon222926   174   X: 875775-875948 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56F10.1.1 872603 875948 1

1 Sequence

Length
1704

1 Sequence Ontology Term

Identifier Name Description
transcript