WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC13.3.1 Sequence Name  ZC13.3.1
Length (nt)  2559   Chromosome Location  X: 882951-888394
Chromosome . Primary Identifier  X Chromosome Location . Start  882951
Chromosome Location . End  888394 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC13.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022504 mam-1 ZC13.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC13.3 ZC13.3 2286   X: 883210-883359

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC13.3.1 882951 888394 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222951   409   X: 882951-883359 Caenorhabditis elegans
Exon222952   134   X: 883978-884111 Caenorhabditis elegans
Exon222953   258   X: 884159-884416 Caenorhabditis elegans
Exon222954   74   X: 884463-884536 Caenorhabditis elegans
Exon222955   66   X: 884583-884648 Caenorhabditis elegans
Exon222956   314   X: 885527-885840 Caenorhabditis elegans
Exon222957   110   X: 885883-885992 Caenorhabditis elegans
Exon222958   192   X: 886041-886232 Caenorhabditis elegans
Exon222959   361   X: 886541-886901 Caenorhabditis elegans
Exon222960   126   X: 886949-887074 Caenorhabditis elegans
Exon222961   245   X: 887549-887793 Caenorhabditis elegans
Exon222962   101   X: 888028-888128 Caenorhabditis elegans
Exon222963   98   X: 888184-888281 Caenorhabditis elegans
Exon222964   71   X: 888324-888394 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC13.3.1 882951 888394 -1

1 Sequence

Length
2559

1 Sequence Ontology Term

Identifier Name Description
transcript