WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F35H12.2c Sequence Name  F35H12.2c
Length (nt)  1716   Chromosome Location  X: 929059-929101
Chromosome . Primary Identifier  X Chromosome Location . Start  929059
Chromosome Location . End  929101
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35H12.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37909 TBC-11, isoform c 66.9 571 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00046424
WBRNAi00014381

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F35H12.2c 929059 929101 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018075 tbc-11 F35H12.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F35H12.2c 929059 929101 1
CDS:F35H12.2c 929155 929345 1
CDS:F35H12.2c 929496 929861 1
CDS:F35H12.2c 930280 930423 1
CDS:F35H12.2c 930471 930559 1
CDS:F35H12.2c 930607 930781 1
CDS:F35H12.2c 930865 931236 1
CDS:F35H12.2c 931731 931867 1
CDS:F35H12.2c 931923 932033 1
CDS:F35H12.2c 932085 932172 1

1 Sequence

Length
1716

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35H12.2c.2 F35H12.2c.2 2553   X: 925798-932251
Transcript:F35H12.2c.3 F35H12.2c.3 2079   X: 926551-932172
Transcript:F35H12.2c.4 F35H12.2c.4 1993   X: 926967-932172
Transcript:F35H12.2c.1 F35H12.2c.1 1908   X: 928948-932253