WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H8.3.1 Sequence Name  F53H8.3.1
Length (nt)  1644   Chromosome Location  X: 938543-942609
Chromosome . Primary Identifier  X Chromosome Location . Start  938543
Chromosome Location . End  942609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018779 F53H8.3 F53H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H8.3 F53H8.3 1530   X: 938596-938609

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.3.1 938543 942609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223127   67   X: 938543-938609 Caenorhabditis elegans
Exon223128   120   X: 938667-938786 Caenorhabditis elegans
Exon223129   99   X: 938833-938931 Caenorhabditis elegans
Exon223130   99   X: 938980-939078 Caenorhabditis elegans
Exon223131   133   X: 939124-939256 Caenorhabditis elegans
Exon223132   273   X: 939665-939937 Caenorhabditis elegans
Exon223133   152   X: 940170-940321 Caenorhabditis elegans
Exon223134   178   X: 940370-940547 Caenorhabditis elegans
Exon223135   111   X: 941474-941584 Caenorhabditis elegans
Exon223136   87   X: 941633-941719 Caenorhabditis elegans
Exon223137   82   X: 942240-942321 Caenorhabditis elegans
Exon223138   243   X: 942367-942609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.3.1 938543 942609 1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
transcript