WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H8.4.1 Sequence Name  F53H8.4.1
Length (nt)  1450   Chromosome Location  X: 944826-948883
Chromosome . Primary Identifier  X Chromosome Location . Start  944826
Chromosome Location . End  948883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004893 sms-2 F53H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H8.4 F53H8.4 1008   X: 945268-945400

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.4.1 944826 948883 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223139   575   X: 944826-945400 Caenorhabditis elegans
Exon223140   177   X: 945801-945977 Caenorhabditis elegans
Exon223141   150   X: 946045-946194 Caenorhabditis elegans
Exon223142   207   X: 946672-946878 Caenorhabditis elegans
Exon223143   224   X: 947509-947732 Caenorhabditis elegans
Exon223144   117   X: 948767-948883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.4.1 944826 948883 -1

1 Sequence

Length
1450

1 Sequence Ontology Term

Identifier Name Description
transcript