WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H8.2.1 Sequence Name  F53H8.2.1
Length (nt)  1530   Chromosome Location  X: 950782-954233
Chromosome . Primary Identifier  X Chromosome Location . Start  950782
Chromosome Location . End  954233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H8.2 F53H8.2 1308   X: 950808-950839

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.2.1 950782 954233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223165   58   X: 950782-950839 Caenorhabditis elegans
Exon223166   92   X: 950908-950999 Caenorhabditis elegans
Exon223167   284   X: 951316-951599 Caenorhabditis elegans
Exon223168   101   X: 951683-951783 Caenorhabditis elegans
Exon223169   145   X: 951835-951979 Caenorhabditis elegans
Exon223170   158   X: 952030-952187 Caenorhabditis elegans
Exon223171   144   X: 952549-952692 Caenorhabditis elegans
Exon223172   154   X: 953565-953718 Caenorhabditis elegans
Exon223173   80   X: 953786-953865 Caenorhabditis elegans
Exon223174   314   X: 953920-954233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.2.1 950782 954233 1

1 Sequence

Length
1530

1 Sequence Ontology Term

Identifier Name Description
transcript