WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C1.2.2 Sequence Name  C44C1.2.2
Length (nt)  1260   Chromosome Location  X: 957888-960585
Chromosome . Primary Identifier  X Chromosome Location . Start  957888
Chromosome Location . End  960585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C1.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016642 chil-10 C44C1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C1.2 C44C1.2 1116   X: 957927-958127

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C1.2.2 957888 960585 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223166   240   X: 957888-958127 Caenorhabditis elegans
Exon223168   297   X: 958172-958468 Caenorhabditis elegans
Exon223170   173   X: 959170-959342 Caenorhabditis elegans
Exon223172   67   X: 959392-959458 Caenorhabditis elegans
Exon223174   57   X: 959535-959591 Caenorhabditis elegans
Exon223176   110   X: 959738-959847 Caenorhabditis elegans
Exon223178   316   X: 960270-960585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C1.2.2 957888 960585 1

1 Sequence

Length
1260

1 Sequence Ontology Term

Identifier Name Description
transcript