WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C1.5a.1 Sequence Name  C44C1.5a.1
Length (nt)  1349   Chromosome Location  X: 975525-978008
Chromosome . Primary Identifier  X Chromosome Location . Start  975525
Chromosome Location . End  978008 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C1.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016644 abhd-3.2 C44C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C1.5a C44C1.5a 1128   X: 975740-975903

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C1.5a.1 975525 978008 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223199   379   X: 975525-975903 Caenorhabditis elegans
Exon223200   67   X: 976167-976233 Caenorhabditis elegans
Exon223201   148   X: 976282-976429 Caenorhabditis elegans
Exon223203   174   X: 976718-976891 Caenorhabditis elegans
Exon223204   330   X: 976942-977271 Caenorhabditis elegans
Exon223206   167   X: 977712-977878 Caenorhabditis elegans
Exon223209   84   X: 977925-978008 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C1.5a.1 975525 978008 -1

1 Sequence

Length
1349

1 Sequence Ontology Term

Identifier Name Description
transcript