WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09E10.2b Sequence Name  C09E10.2b
Length (nt)  2859   Chromosome Location  X: 984635-984838
Chromosome . Primary Identifier  X Chromosome Location . Start  984635
Chromosome Location . End  984838
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E10.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08039 DGK-1, isoform b 106.8 952 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00001254
WBRNAi00040184

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09E10.2b 984635 984838 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000958 dgk-1 C09E10.2 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09E10.2b 984635 984838 -1
CDS:C09E10.2b 985192 985290 -1
CDS:C09E10.2b 985338 985421 -1
CDS:C09E10.2b 985827 985973 -1
CDS:C09E10.2b 986020 986145 -1
CDS:C09E10.2b 986190 986522 -1
CDS:C09E10.2b 987240 987649 -1
CDS:C09E10.2b 987701 987848 -1
CDS:C09E10.2b 988216 988559 -1
CDS:C09E10.2b 988609 988732 -1
CDS:C09E10.2b 988933 989051 -1
CDS:C09E10.2b 989481 989640 -1
CDS:C09E10.2b 989686 989817 -1
CDS:C09E10.2b 990314 990402 -1
CDS:C09E10.2b 990456 990638 -1
CDS:C09E10.2b 991079 991235 -1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09E10.2b.1 C09E10.2b.1 3734   X: 983903-991456