WormMine: Gene WBGene00197873

• WormBase Gene ID: WBGene00197873
• Gene Name: F55A4.12
• Sequence Name: F55A4.12
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by daf-2 and ogt-1 based on microarray and RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 145

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00197873

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F55A4.12	F55A4.12	145	X: 1018699-1018843

Other

0 CDSs

0 RNAi Result

9 Allele

• gk963652
• gk963725
• gk270362
• gk339448
• gk627215
• gk963334
• gk537807
• WBVar01824064
• WBVar01824063

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00197873
• Start: 1018699
• End: 1018843
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_1018844..1023386
• Length (nt): 4543
• Chromosome Location: X: 1018844-1023386
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2.	Student's t-test, fold change > 2, p-value < 0.05.	WBPaper00055386:daf-2(e1370)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00197873
• Start: 1018699
• End: 1018843
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 145

1 Sequence Ontology Term