WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03E6.5a.1 Sequence Name  K03E6.5a.1
Length (nt)  1204   Chromosome Location  X: 1057489-1062447
Chromosome . Primary Identifier  X Chromosome Location . Start  1057489
Chromosome Location . End  1062447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03E6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006741 unc-1 K03E6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03E6.5a K03E6.5a 858   X: 1057831-1057906

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K03E6.5a.1 1057489 1062447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223404   418   X: 1057489-1057906 Caenorhabditis elegans
Exon223405   215   X: 1058071-1058285 Caenorhabditis elegans
Exon223407   274   X: 1058962-1059235 Caenorhabditis elegans
Exon223409   125   X: 1059294-1059418 Caenorhabditis elegans
Exon223411   114   X: 1060572-1060685 Caenorhabditis elegans
Exon223414   58   X: 1062390-1062447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K03E6.5a.1 1057489 1062447 -1

1 Sequence

Length
1204

1 Sequence Ontology Term

Identifier Name Description
transcript