WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03E6.6.1 Sequence Name  K03E6.6.1
Length (nt)  521   Chromosome Location  X: 1079430-1080649
Chromosome . Primary Identifier  X Chromosome Location . Start  1079430
Chromosome Location . End  1080649 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03E6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003991 pfn-3 K03E6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03E6.6 K03E6.6 381   X: 1079546-1079643

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03E6.6.1 1079430 1080649 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223448   214   X: 1079430-1079643 Caenorhabditis elegans
Exon223449   124   X: 1079696-1079819 Caenorhabditis elegans
Exon223450   48   X: 1079866-1079913 Caenorhabditis elegans
Exon223451   135   X: 1080515-1080649 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03E6.6.1 1079430 1080649 -1

1 Sequence

Length
521

1 Sequence Ontology Term

Identifier Name Description
transcript