WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E7.1a Sequence Name  F49E7.1a
Length (nt)  3282   Chromosome Location  X: 1097156-1097257
Chromosome . Primary Identifier  X Chromosome Location . Start  1097156
Chromosome Location . End  1097257
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38712 RME-6, isoform a 124.0 1093 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00001773
WBRNAi00047865
WBRNAi00047866
WBRNAi00010216
WBRNAi00015329
WBRNAi00076452
WBRNAi00032548
WBRNAi00061818
WBRNAi00110530
WBRNAi00082841

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E7.1a 1097156 1097257 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004377 rme-6 F49E7.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E7.1a 1097156 1097257 1
CDS:F49E7.1a 1097313 1097399 1
CDS:F49E7.1a 1097444 1097541 1
CDS:F49E7.1a 1097899 1098001 1
CDS:F49E7.1a 1098045 1098347 1
CDS:F49E7.1a 1098643 1098751 1
CDS:F49E7.1a 1098804 1099120 1
CDS:F49E7.1a 1099169 1099324 1
CDS:F49E7.1a 1099654 1099822 1
CDS:F49E7.1a 1099871 1100305 1
CDS:F49E7.1a 1100618 1100909 1
CDS:F49E7.1a 1100956 1101183 1
CDS:F49E7.1a 1101472 1101606 1
CDS:F49E7.1a 1101658 1101883 1
CDS:F49E7.1a 1101931 1102046 1
CDS:F49E7.1a 1102501 1102573 1
CDS:F49E7.1a 1102649 1102846 1
CDS:F49E7.1a 1103048 1103182 1

1 Sequence

Length
3282

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E7.1a.1 F49E7.1a.1 3424   X: 1097152-1103320