WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E7.1b.2 Sequence Name  F49E7.1b.2
Length (nt)  2556   Chromosome Location  X: 1098934-1103313
Chromosome . Primary Identifier  X Chromosome Location . Start  1098934
Chromosome Location . End  1103313 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E7.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004377 rme-6 F49E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E7.1b F49E7.1b 285   X: 1102697-1102846

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E7.1b.2 1098934 1103313 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223487   187   X: 1098934-1099120 Caenorhabditis elegans
Exon223490   156   X: 1099169-1099324 Caenorhabditis elegans
Exon223493   169   X: 1099654-1099822 Caenorhabditis elegans
Exon223497   435   X: 1099871-1100305 Caenorhabditis elegans
Exon223500   292   X: 1100618-1100909 Caenorhabditis elegans
Exon223504   228   X: 1100956-1101183 Caenorhabditis elegans
Exon223508   135   X: 1101472-1101606 Caenorhabditis elegans
Exon223512   226   X: 1101658-1101883 Caenorhabditis elegans
Exon223516   116   X: 1101931-1102046 Caenorhabditis elegans
Exon223521   346   X: 1102501-1102846 Caenorhabditis elegans
Exon223526   266   X: 1103048-1103313 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E7.1b.2 1098934 1103313 1

1 Sequence

Length
2556

1 Sequence Ontology Term

Identifier Name Description
transcript