WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D9.2.1 Sequence Name  C05D9.2.1
Length (nt)  1048   Chromosome Location  X: 1125615-1128288
Chromosome . Primary Identifier  X Chromosome Location . Start  1125615
Chromosome Location . End  1128288 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015471 lmp-2 C05D9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D9.2 C05D9.2 891   X: 1125763-1125861

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D9.2.1 1125615 1128288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223577   89   X: 1125615-1125703 Caenorhabditis elegans
Exon223580   99   X: 1125763-1125861 Caenorhabditis elegans
Exon223582   87   X: 1126205-1126291 Caenorhabditis elegans
Exon223585   126   X: 1126832-1126957 Caenorhabditis elegans
Exon223588   296   X: 1127138-1127433 Caenorhabditis elegans
Exon223591   62   X: 1127609-1127670 Caenorhabditis elegans
Exon223594   101   X: 1127719-1127819 Caenorhabditis elegans
Exon223597   188   X: 1128101-1128288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D9.2.1 1125615 1128288 1

1 Sequence

Length
1048

1 Sequence Ontology Term

Identifier Name Description
transcript