WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13G4.4.2 Sequence Name  T13G4.4.2
Length (nt)  1954   Chromosome Location  X: 1188433-1191678
Chromosome . Primary Identifier  X Chromosome Location . Start  1188433
Chromosome Location . End  1191678 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13G4.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020491 T13G4.4 T13G4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13G4.4 T13G4.4 915   X: 1188537-1188690

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13G4.4.2 1188433 1191678 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223720   258   X: 1188433-1188690 Caenorhabditis elegans
Exon223723   200   X: 1189467-1189666 Caenorhabditis elegans
Exon223726   168   X: 1189842-1190009 Caenorhabditis elegans
Exon223729   256   X: 1190215-1190470 Caenorhabditis elegans
Exon223732   74   X: 1190520-1190593 Caenorhabditis elegans
Exon223736   998   X: 1190681-1191678 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13G4.4.2 1188433 1191678 -1

1 Sequence

Length
1954

1 Sequence Ontology Term

Identifier Name Description
transcript