WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25G6.3.1 Sequence Name  C25G6.3.1
Length (nt)  1749   Chromosome Location  X: 1233093-1238903
Chromosome . Primary Identifier  X Chromosome Location . Start  1233093
Chromosome Location . End  1238903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25G6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016108 C25G6.3 C25G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25G6.3 C25G6.3 1737   X: 1233093-1233263

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25G6.3.1 1233093 1238903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223798   171   X: 1233093-1233263 Caenorhabditis elegans
Exon223799   83   X: 1233311-1233393 Caenorhabditis elegans
Exon223800   145   X: 1235845-1235989 Caenorhabditis elegans
Exon223801   192   X: 1236039-1236230 Caenorhabditis elegans
Exon223802   87   X: 1236291-1236377 Caenorhabditis elegans
Exon223803   274   X: 1236504-1236777 Caenorhabditis elegans
Exon223804   158   X: 1237110-1237267 Caenorhabditis elegans
Exon223805   104   X: 1237317-1237420 Caenorhabditis elegans
Exon223806   208   X: 1238033-1238240 Caenorhabditis elegans
Exon223807   210   X: 1238284-1238493 Caenorhabditis elegans
Exon223808   117   X: 1238787-1238903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25G6.3.1 1233093 1238903 -1

1 Sequence

Length
1749

1 Sequence Ontology Term

Identifier Name Description
transcript