WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H42K12.3.2 Sequence Name  H42K12.3.2
Length (nt)  1694   Chromosome Location  X: 1311608-1316640
Chromosome . Primary Identifier  X Chromosome Location . Start  1311608
Chromosome Location . End  1316640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H42K12.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019272 H42K12.3 H42K12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H42K12.3 H42K12.3 1569   X: 1311621-1311690

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H42K12.3.2 1311608 1316640 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223867   83   X: 1311608-1311690 Caenorhabditis elegans
Exon223869   125   X: 1312534-1312658 Caenorhabditis elegans
Exon223872   154   X: 1312708-1312861 Caenorhabditis elegans
Exon223875   140   X: 1312989-1313128 Caenorhabditis elegans
Exon223878   133   X: 1313173-1313305 Caenorhabditis elegans
Exon223881   219   X: 1313366-1313584 Caenorhabditis elegans
Exon223884   302   X: 1314340-1314641 Caenorhabditis elegans
Exon223887   145   X: 1314686-1314830 Caenorhabditis elegans
Exon223890   155   X: 1315259-1315413 Caenorhabditis elegans
Exon223894   238   X: 1316403-1316640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H42K12.3.2 1311608 1316640 1

1 Sequence

Length
1694

1 Sequence Ontology Term

Identifier Name Description
transcript