WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C3.6.1 Sequence Name  F56C3.6.1
Length (nt)  1200   Chromosome Location  X: 1365474-1367516
Chromosome . Primary Identifier  X Chromosome Location . Start  1365474
Chromosome Location . End  1367516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018943 dgn-2 F56C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C3.6 F56C3.6 1200   X: 1365474-1366326

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C3.6.1 1365474 1367516 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223954   853   X: 1365474-1366326 Caenorhabditis elegans
Exon223955   227   X: 1366372-1366598 Caenorhabditis elegans
Exon223956   120   X: 1367397-1367516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C3.6.1 1365474 1367516 -1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
transcript