WormMine: Gene WBGene00023070

• WormBase Gene ID: WBGene00023070
• Gene Name: F56C3.t1
• Sequence Name: F56C3.t1
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by dpy-21 and ilc-17.1 based on RNA-seq studies.
• Biotype: SO:0001272
• Genetic Position: :±
• Length (nt): 72

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00023070

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F56C3.t1	F56C3.t1	72	X: 1379603-1379674

Other

0 CDSs

0 RNAi Result

7 Allele

• gk963725
• tm11266
• WBVar02122721
• gk629986
• gk860253
• gk324732
• gk481692

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00023070
• Start: 1379603
• End: 1379674
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_1374714..1379602
• Length (nt): 4889
• Chromosome Location: X: 1374714-1379602
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066594:ilc-17.1(syb5296)_upregulated
	Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00023070
• Start: 1379603
• End: 1379674
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 72

1 Sequence Ontology Term