WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:W05H7.4e.1 Sequence Name  W05H7.4e.1
Length (nt)  2327   Chromosome Location  X: 1440372-1446643
Chromosome . Primary Identifier  X Chromosome Location . Start  1440372
Chromosome Location . End  1446643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05H7.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021047 zfp-3 W05H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05H7.4e W05H7.4e 2001   X: 1440631-1441131

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05H7.4e.1 1440372 1446643 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224055   760   X: 1440372-1441131 Caenorhabditis elegans
Exon224060   174   X: 1441186-1441359 Caenorhabditis elegans
Exon224064   634   X: 1441543-1442176 Caenorhabditis elegans
Exon224068   205   X: 1442238-1442442 Caenorhabditis elegans
Exon224072   142   X: 1442494-1442635 Caenorhabditis elegans
Exon224075   164   X: 1443153-1443316 Caenorhabditis elegans
Exon224080   93   X: 1444924-1445016 Caenorhabditis elegans
Exon224084   155   X: 1446489-1446643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05H7.4e.1 1440372 1446643 -1

1 Sequence

Length
2327

1 Sequence Ontology Term

Identifier Name Description
transcript