WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1005.3 Sequence Name  D1005.3
Length (nt)  960   Chromosome Location  X: 1452801-1452861
Chromosome . Primary Identifier  X Chromosome Location . Start  1452801
Chromosome Location . End  1452861
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1005.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47425 CEBP-1 37.1 319 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00113218
WBRNAi00043316
WBRNAi00012488
WBRNAi00030300
WBRNAi00112988

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1005.3 1452801 1452861 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016997 cebp-1 D1005.3 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1005.3 1452801 1452861 -1
CDS:D1005.3 1452911 1453656 -1
CDS:D1005.3 1453706 1453858 -1

1 Sequence

Length
960

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1005.3.1 D1005.3.1 1076   X: 1452695-1453868