WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E10.5.1 Sequence Name  F09E10.5.1
Length (nt)  1293   Chromosome Location  X: 1489333-1494356
Chromosome . Primary Identifier  X Chromosome Location . Start  1489333
Chromosome Location . End  1494356 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017295 F09E10.5 F09E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E10.5 F09E10.5 954   X: 1489672-1489834

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E10.5.1 1489333 1494356 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224136   502   X: 1489333-1489834 Caenorhabditis elegans
Exon224137   79   X: 1490133-1490211 Caenorhabditis elegans
Exon224138   61   X: 1490271-1490331 Caenorhabditis elegans
Exon224139   198   X: 1490377-1490574 Caenorhabditis elegans
Exon224141   295   X: 1491883-1492177 Caenorhabditis elegans
Exon224142   77   X: 1492231-1492307 Caenorhabditis elegans
Exon224143   81   X: 1494276-1494356 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E10.5.1 1489333 1494356 -1

1 Sequence

Length
1293

1 Sequence Ontology Term

Identifier Name Description
transcript