WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E10.7a.1 Sequence Name  F09E10.7a.1
Length (nt)  616   Chromosome Location  X: 1500180-1501852
Chromosome . Primary Identifier  X Chromosome Location . Start  1500180
Chromosome Location . End  1501852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E10.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017297 F09E10.7 F09E10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E10.7a F09E10.7a 330   X: 1500349-1500522

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E10.7a.1 1500180 1501852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224150   343   X: 1500180-1500522 Caenorhabditis elegans
Exon224153   53   X: 1500570-1500622 Caenorhabditis elegans
Exon224158   141   X: 1500718-1500858 Caenorhabditis elegans
Exon224164   79   X: 1501774-1501852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E10.7a.1 1500180 1501852 -1

1 Sequence

Length
616

1 Sequence Ontology Term

Identifier Name Description
transcript