WormMine: Gene WBGene00219711

• WormBase Gene ID: WBGene00219711
• Gene Name: anr-49
• Sequence Name: K06A9.6
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in PHso1L and excretory system based on single-cell RNA-seq studies. Is affected by dpy-21; nfki-1; and etr-1 based on RNA-seq studies.
• Biotype: SO:0002182
• Genetic Position: X :-17.9621±
• Length (nt): 4007

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219711

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:K06A9.6	K06A9.6	2057	X: 1531977-1535983

Other

0 CDSs

2 RNAi Result

• WBRNAi00050036
• WBRNAi00016660

150 Allele

• gk963725
• gk964444
• gk964445
• WBVar02063474
• WBVar02063476
• WBVar02063475
• WBVar01600587
• WBVar01600588
• WBVar01600589
• WBVar01600590
• WBVar01600591
• WBVar01600594
• WBVar01600595
• WBVar01600592
• WBVar01600593
• WBVar01600598
• WBVar01600599
• WBVar01600596
• WBVar01600597
• WBVar00075146
• WBVar00075147
• WBVar00075148
• WBVar00075149
• WBVar00075142
• WBVar00075143
• WBVar00075144
• WBVar00075145
• WBVar00075150
• WBVar00075151
• WBVar00075152

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219711
• Start: 1531977
• End: 1535983
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_1535984..1536365
• Length (nt): 382
• Chromosome Location: X: 1535984-1536365
• Organism: Caenorhabditis elegans

8 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Bacteria: E.faecalis strain OG1RF	Transcripts that showed significantly increased expression after infection by E. faecalis OG1RF.	Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05.	WBPaper00059754:E.faecalis_OG1RF_upregulated
	Transcripts that showed significantly decreased expression in day 3 adult hermaphrodite comparing to in L4 larva daf-16(mu86);glp-1(e2141) animals.	Fold change > 2, FDR < 0.05	WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
	Transcripts that showed significantly decreased expression in day 3 adult hermaphrodite comparing to in L4 larva glp-1(e2141) animals.	Fold change > 2, FDR < 0.05	WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
	Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_upregulated
	Transcripts that showed significantly decreased expression in nfki-1(cer1) animals at L4 larva stage, comparing to in N2 animals.	Differentially expressed genes between wild type and knockouts were explored using DESeq2 R package (v.1.20.0) considering a threshold of adjusted p value < 0.01.	WBPaper00060445:nfki-1(cer1)_downregulated_L4
	Transcripts of noncoding genes that showed significantly increased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_enriched_noncoding-RNA
	Single-cell RNA-Seq cell group 34_0 expressed in glia.	scVI 0.6.0	WBPaper00065841:34_0
	Single-cell RNA-Seq cell group 34_1 expressed in glia.	scVI 0.6.0	WBPaper00065841:34_1

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219711
• Start: 1531977
• End: 1535983
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 4007

1 Sequence Ontology Term