WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A9.2.1 Sequence Name  K06A9.2.1
Length (nt)  1926   Chromosome Location  X: 1536366-1540299
Chromosome . Primary Identifier  X Chromosome Location . Start  1536366
Chromosome Location . End  1540299 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019436 K06A9.2 K06A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A9.2 K06A9.2 1551   X: 1536508-1536567

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.2.1 1536366 1540299 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224190   202   X: 1536366-1536567 Caenorhabditis elegans
Exon224191   108   X: 1536619-1536726 Caenorhabditis elegans
Exon224192   153   X: 1537356-1537508 Caenorhabditis elegans
Exon224193   175   X: 1537621-1537795 Caenorhabditis elegans
Exon224194   100   X: 1537841-1537940 Caenorhabditis elegans
Exon224195   172   X: 1538366-1538537 Caenorhabditis elegans
Exon224196   278   X: 1538586-1538863 Caenorhabditis elegans
Exon224197   196   X: 1539318-1539513 Caenorhabditis elegans
Exon224198   125   X: 1539565-1539689 Caenorhabditis elegans
Exon224199   417   X: 1539883-1540299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.2.1 1536366 1540299 1

1 Sequence

Length
1926

1 Sequence Ontology Term

Identifier Name Description
transcript