WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A9.1f.1 Sequence Name  K06A9.1f.1
Length (nt)  5409   Chromosome Location  X: 1547509-1559728
Chromosome . Primary Identifier  X Chromosome Location . Start  1547509
Chromosome Location . End  1559728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A9.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019435 K06A9.1 K06A9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A9.1f K06A9.1f 5409   X: 1547509-1547620

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.1f.1 1547509 1559728 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224205   112   X: 1547509-1547620 Caenorhabditis elegans
Exon224212   113   X: 1547671-1547783 Caenorhabditis elegans
Exon224219   84   X: 1547833-1547916 Caenorhabditis elegans
Exon224226   86   X: 1547963-1548048 Caenorhabditis elegans
Exon224233   78   X: 1548105-1548182 Caenorhabditis elegans
Exon224240   191   X: 1548234-1548424 Caenorhabditis elegans
Exon224246   4161   X: 1548473-1552633 Caenorhabditis elegans
Exon224255   30   X: 1558455-1558484 Caenorhabditis elegans
Exon224262   80   X: 1558758-1558837 Caenorhabditis elegans
Exon224269   194   X: 1558881-1559074 Caenorhabditis elegans
Exon224276   78   X: 1559118-1559195 Caenorhabditis elegans
Exon224283   80   X: 1559477-1559556 Caenorhabditis elegans
Exon224288   122   X: 1559607-1559728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.1f.1 1547509 1559728 1

1 Sequence

Length
5409

1 Sequence Ontology Term

Identifier Name Description
transcript