WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A9.1g.1 Sequence Name  K06A9.1g.1
Length (nt)  5685   Chromosome Location  X: 1547509-1559728
Chromosome . Primary Identifier  X Chromosome Location . Start  1547509
Chromosome Location . End  1559728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A9.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019435 K06A9.1 K06A9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A9.1g K06A9.1g 5685   X: 1547509-1547620

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.1g.1 1547509 1559728 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224206   112   X: 1547509-1547620 Caenorhabditis elegans
Exon224213   113   X: 1547671-1547783 Caenorhabditis elegans
Exon224220   84   X: 1547833-1547916 Caenorhabditis elegans
Exon224227   86   X: 1547963-1548048 Caenorhabditis elegans
Exon224234   78   X: 1548105-1548182 Caenorhabditis elegans
Exon224241   191   X: 1548234-1548424 Caenorhabditis elegans
Exon224247   4437   X: 1548473-1552909 Caenorhabditis elegans
Exon224256   30   X: 1558455-1558484 Caenorhabditis elegans
Exon224263   80   X: 1558758-1558837 Caenorhabditis elegans
Exon224270   194   X: 1558881-1559074 Caenorhabditis elegans
Exon224277   78   X: 1559118-1559195 Caenorhabditis elegans
Exon224284   80   X: 1559477-1559556 Caenorhabditis elegans
Exon224289   122   X: 1559607-1559728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A9.1g.1 1547509 1559728 1

1 Sequence

Length
5685

1 Sequence Ontology Term

Identifier Name Description
transcript