WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0344.2.1 Sequence Name  B0344.2.1
Length (nt)  2088   Chromosome Location  X: 1576637-1591320
Chromosome . Primary Identifier  X Chromosome Location . Start  1576637
Chromosome Location . End  1591320 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0344.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006955 wrt-9 B0344.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0344.2 B0344.2 1662   X: 1576638-1576755

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0344.2.1 1576637 1591320 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224308   119   X: 1576637-1576755 Caenorhabditis elegans
Exon224309   164   X: 1577354-1577517 Caenorhabditis elegans
Exon224310   89   X: 1584872-1584960 Caenorhabditis elegans
Exon224311   74   X: 1585448-1585521 Caenorhabditis elegans
Exon224312   103   X: 1586509-1586611 Caenorhabditis elegans
Exon224313   68   X: 1587555-1587622 Caenorhabditis elegans
Exon224314   160   X: 1587706-1587865 Caenorhabditis elegans
Exon224315   87   X: 1588312-1588398 Caenorhabditis elegans
Exon224316   157   X: 1588451-1588607 Caenorhabditis elegans
Exon224317   453   X: 1589119-1589571 Caenorhabditis elegans
Exon224324   614   X: 1590707-1591320 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0344.2.1 1576637 1591320 1

1 Sequence

Length
2088

1 Sequence Ontology Term

Identifier Name Description
transcript