WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK380.2c.1 Sequence Name  ZK380.2c.1
Length (nt)  1296   Chromosome Location  X: 1631466-1635727
Chromosome . Primary Identifier  X Chromosome Location . Start  1631466
Chromosome Location . End  1635727 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK380.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022723 ZK380.2 ZK380.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK380.2c ZK380.2c 1296   X: 1631466-1631661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK380.2c.1 1631466 1635727 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224388   196   X: 1631466-1631661 Caenorhabditis elegans
Exon224392   72   X: 1632015-1632086 Caenorhabditis elegans
Exon224398   90   X: 1632230-1632319 Caenorhabditis elegans
Exon224402   72   X: 1632371-1632442 Caenorhabditis elegans
Exon224406   63   X: 1632673-1632735 Caenorhabditis elegans
Exon224410   96   X: 1633591-1633686 Caenorhabditis elegans
Exon224414   96   X: 1633829-1633924 Caenorhabditis elegans
Exon224417   96   X: 1634026-1634121 Caenorhabditis elegans
Exon224420   96   X: 1634517-1634612 Caenorhabditis elegans
Exon224424   96   X: 1634970-1635065 Caenorhabditis elegans
Exon224428   279   X: 1635278-1635556 Caenorhabditis elegans
Exon224432   44   X: 1635684-1635727 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK380.2c.1 1631466 1635727 1

1 Sequence

Length
1296

1 Sequence Ontology Term

Identifier Name Description
transcript