WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK380.2d.1 Sequence Name  ZK380.2d.1
Length (nt)  1200   Chromosome Location  X: 1631466-1635727
Chromosome . Primary Identifier  X Chromosome Location . Start  1631466
Chromosome Location . End  1635727 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK380.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022723 ZK380.2 ZK380.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK380.2d ZK380.2d 1200   X: 1631466-1631661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK380.2d.1 1631466 1635727 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224389   196   X: 1631466-1631661 Caenorhabditis elegans
Exon224393   72   X: 1632015-1632086 Caenorhabditis elegans
Exon224399   90   X: 1632230-1632319 Caenorhabditis elegans
Exon224403   72   X: 1632371-1632442 Caenorhabditis elegans
Exon224407   63   X: 1632673-1632735 Caenorhabditis elegans
Exon224411   96   X: 1633591-1633686 Caenorhabditis elegans
Exon224415   96   X: 1633829-1633924 Caenorhabditis elegans
Exon224421   96   X: 1634517-1634612 Caenorhabditis elegans
Exon224425   96   X: 1634970-1635065 Caenorhabditis elegans
Exon224429   279   X: 1635278-1635556 Caenorhabditis elegans
Exon224433   44   X: 1635684-1635727 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK380.2d.1 1631466 1635727 1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
transcript