WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36C9.3.1 Sequence Name  C36C9.3.1
Length (nt)  1539   Chromosome Location  X: 1676205-1678121
Chromosome . Primary Identifier  X Chromosome Location . Start  1676205
Chromosome Location . End  1678121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36C9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016486 fbxa-170 C36C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36C9.3 C36C9.3 1233   X: 1676497-1676739

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36C9.3.1 1676205 1678121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224469   535   X: 1676205-1676739 Caenorhabditis elegans
Exon224470   712   X: 1677014-1677725 Caenorhabditis elegans
Exon224471   81   X: 1677777-1677857 Caenorhabditis elegans
Exon224472   211   X: 1677911-1678121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36C9.3.1 1676205 1678121 -1

1 Sequence

Length
1539

1 Sequence Ontology Term

Identifier Name Description
transcript