WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36C9.4.1 Sequence Name  C36C9.4.1
Length (nt)  1803   Chromosome Location  X: 1693883-1696979
Chromosome . Primary Identifier  X Chromosome Location . Start  1693883
Chromosome Location . End  1696979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36C9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016487 C36C9.4 C36C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36C9.4 C36C9.4 1803   X: 1693883-1694087

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36C9.4.1 1693883 1696979 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224496   205   X: 1693883-1694087 Caenorhabditis elegans
Exon224497   149   X: 1694137-1694285 Caenorhabditis elegans
Exon224498   207   X: 1694332-1694538 Caenorhabditis elegans
Exon224499   152   X: 1694584-1694735 Caenorhabditis elegans
Exon224500   265   X: 1695001-1695265 Caenorhabditis elegans
Exon224501   226   X: 1695349-1695574 Caenorhabditis elegans
Exon224502   246   X: 1695625-1695870 Caenorhabditis elegans
Exon224503   139   X: 1696538-1696676 Caenorhabditis elegans
Exon224504   84   X: 1696720-1696803 Caenorhabditis elegans
Exon224505   130   X: 1696850-1696979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36C9.4.1 1693883 1696979 -1

1 Sequence

Length
1803

1 Sequence Ontology Term

Identifier Name Description
transcript