WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07G6.2.1 Sequence Name  F07G6.2.1
Length (nt)  729   Chromosome Location  X: 1727356-1729154
Chromosome . Primary Identifier  X Chromosome Location . Start  1727356
Chromosome Location . End  1729154 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07G6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017222 F07G6.2 F07G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07G6.2 F07G6.2 729   X: 1727356-1727505

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07G6.2.1 1727356 1729154 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224534   150   X: 1727356-1727505 Caenorhabditis elegans
Exon224535   57   X: 1727572-1727628 Caenorhabditis elegans
Exon224536   111   X: 1728104-1728214 Caenorhabditis elegans
Exon224537   75   X: 1728261-1728335 Caenorhabditis elegans
Exon224538   60   X: 1728387-1728446 Caenorhabditis elegans
Exon224539   81   X: 1728510-1728590 Caenorhabditis elegans
Exon224540   195   X: 1728960-1729154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07G6.2.1 1727356 1729154 1

1 Sequence

Length
729

1 Sequence Ontology Term

Identifier Name Description
transcript