WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26C11.4a.1 Sequence Name  T26C11.4a.1
Length (nt)  1971   Chromosome Location  X: 1840554-1845544
Chromosome . Primary Identifier  X Chromosome Location . Start  1840554
Chromosome Location . End  1845544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26C11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020830 T26C11.4 T26C11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26C11.4a T26C11.4a 1713   X: 1840775-1841115

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26C11.4a.1 1840554 1845544 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224633   562   X: 1840554-1841115 Caenorhabditis elegans
Exon224635   72   X: 1841727-1841798 Caenorhabditis elegans
Exon224637   123   X: 1841851-1841973 Caenorhabditis elegans
Exon224639   69   X: 1842087-1842155 Caenorhabditis elegans
Exon224641   99   X: 1842302-1842400 Caenorhabditis elegans
Exon224643   117   X: 1843013-1843129 Caenorhabditis elegans
Exon224645   111   X: 1843354-1843464 Caenorhabditis elegans
Exon224647   96   X: 1843697-1843792 Caenorhabditis elegans
Exon224649   81   X: 1843942-1844022 Caenorhabditis elegans
Exon224651   84   X: 1844072-1844155 Caenorhabditis elegans
Exon224653   267   X: 1844248-1844514 Caenorhabditis elegans
Exon224655   227   X: 1844883-1845109 Caenorhabditis elegans
Exon224657   63   X: 1845482-1845544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26C11.4a.1 1840554 1845544 -1

1 Sequence

Length
1971

1 Sequence Ontology Term

Identifier Name Description
transcript